Publications
Found 55 results
Roberts, PLD, Jaffe JS, Trivedi MM.
Submitted. A Multiview, Multimodal Fusion Framework for Classifying Small Marine Animals with an Opto-Acoustic Imaging System. IEEE Workshop on Applications of Computer Vision. Download: 238.pdf (1.08 MB)
Jaffe, JS, Roberts PLD.
Submitted. Estimating fish orientation from broadband, limited-angle, multi-view, acoustic reflections. Journal of the Acoustical Society of America.
Li, W, Jaffe JS.
In Press. Sizing Mie particles from intensity-only angular scatter. Journal of the Optical Society of America.
Karaköylü, EM, Franks PJS, Tanaka Y, Roberts PLD, Jaffe JS.
2009. Copepod feeding quantified by planar laser imaging of gut fluorescence. Limnology and Oceanography: Methods. 7:33-41. Download: 0033.pdf (2.06 MB)
Roberts, PLD, Jaffe JS.
2008. Classification of live, untethered zooplankton from observations of multiple-angle scatter. Journal of the Acoustical Scoienty of America. 124(2):796-802. Download: macz_jasa_paper2.pdf (502.42 KB)
Franks, PJS, Jaffe JS.
2008. Microscale variability in the distributions of large fluorescent particles observed in situ with a planar laser imaging fluorometer. Journal of Marine Systems. 69:254-270. Download: Franks_Jaffe_2008.pdf (1.85 MB)
Jaffe, JS.
2007. A tomographic approach to inverse mie particle characterization from scattered light. Optics Express. 15:12217–12229. Download: Jaffe_Mierecon_Optexp.pdf (280.72 KB)
Roberts, PLD, Jaffe JS.
2007. Multiple angle acoustic classification of zooplankton. Journal of the Acoustical Society of America . 121:2060-2070. Download: macz_jasa2.pdf (369.55 KB)
Jaffe, JS, Simonet F, Roberts PLD, Bowles AE.
2007. Measurement of the acoustic reflectivity of sirenia (Florida manatees) at 171 kHz. Journal of the Acoustical Society of America. 121:158-165. Download: Measurement of the acoustic reflectivity of sirenia (Florida manatees) at 171 kHz.pdf (310.39 KB)
Shao, B, Jaffe JS, Chachisvilis M, Esener SC.
2006. Angular resolved light scattering for discriminating among marine picoplankton: modeling and experimental measurements. Optics Express. 14:12473-12484. Download: Angular resolved light scattering for discriminating among marine picoplankton modeling and experimental measurements.pdf (2.09 MB)
Jaffe, JS.
2006. Using multiple-angle scattered sound to size fish swimbladders. ICES Journal of Marine Science. 65:1092-. Download: Jaffe_ICES_multiangle2006.pdf (306.73 KB)
Ai, Y, Jaffe JS.
2005. Design and preliminary tests of a family of adaptive waveforms to measure blood vessel diameter and wall thickness. IEEE Transactions on Ultrasonics, Ferroelectrics and Frequency Control: Special Issue on Coded Waveforms. 52:250-260. Download: Design_of_adapative_waveforms.pdf (1.25 MB)
Jaffe, JS.
2005. Performance bounds on synchronous laser line scan systems. Optics Express. 13:738-748. Abstract
Download: Performance_bounds_on_laser_line_scan_systems.pdf (228.41 KB)
Jaffe, JS.
2005. Sensing Plankton: Acoustics and Optical Imaging. European Workshop on Harmful Algal Blooms. Download: Jaffe_HABmeeting.pdf (650.13 KB)
Genin, A, Jaffe JS, Reef R, Richter C, Franks PJS.
2005. Swimming Against the Flow: A Mechanism of Zooplankton Aggregation. Science. 308:860-862. Abstract
Download: swimming_against_the_flow.pdf (196.57 KB)
Jaffe, JS.
2005. Three-dimensional probability density functions via tomographic inversion. Siam Journal On Applied Mathematics. 65:1506–1525. Abstract
Download: SIAM_Jaffe.pdf (224.28 KB)
Yahel, R, Yahel G, Berman T, Jaffe JS, Genin A.
2005. Diel pattern with abrupt crepuscular changes of zooplankton over a coral reef. Limnology And Oceanography. 50:930–944. Download: Ruthy_L&O.pdf (407.04 KB)
Schell, C, Jaffe JS.
2004. Experimental verification of an interpolation algorithm for improved estimates of animal position. Journal of the Acoustical Socieity of America. 116:254-261. Abstract
Download: Verification_of_an_algorithm_for_animal_position.pdf (259.9 KB)
Zawada, DG, Jaffe JS.
2003. Changes in the fluorescence of the Caribbean coral Montastraea faveolata during heat-induced bleaching. Limnology and Oceanography. 48:412-425. Abstract
Download: Heat-induced bleaching.pdf (1.6 MB)
De Robertis, A, Schell C, Jaffe JS.
2003. Acoustic observations of the swimming behavior of the euphausiid Euphausia pacifica Hansen. ICES Journal of Marine Science. 60:885-898. Abstract
Download: Acoustic_observations_of_Euphausia_pacifica_Hansen.pdf (495.44 KB)
Moore, KD, Jaffe JS.
2002. Time-evolution of high-resolution topographic measurements of the sea floor using a 3-D laser line scan mapping system. IEEE Journal of Oceanic Engineering. 27:525-545. Download: TimeEvolutionOfTopography.pdf (605.97 KB)
Fuchs, E, Jaffe JS, Long RA, Azam F.
2002. Thin laser light sheet microscope for microbial oceanography. Optics Express. 10:145-154. Abstract
Download: tlsm_osa_2002.pdf (252.24 KB)
Fuchs, E, Zimmerman RC, Jaffe JS.
2002. The effect of elevated levels of phaeophytin in natural water on variable fluorescence measured from phytoplankton. Journal of Plankton Research. 24:1221-1229. Abstract
Download: Phaeophytin effect on fluorescence measured from phytoplankton.pdf (238.76 KB)
Richardson, MD, Briggs KB, Bibee LD, Jumars PA, Sawyer WB, Albert DB, Bennett RH, Berger TK, Buckingham MJ, Chotiros NP et al..
2001. Overview of SAX99: environmental considerations. IEEE Journal of Oceanic Engineering. 26:26-53. Download: SAX99.pdf (989.96 KB)
Franks, PJS, Jaffe JS.
2001. Microscale distributions of phytoplankton: initial results from a two-dimensional imaging fluorometer, OSST. Marine Ecology Progress Series. 220:59–72. Download: Microscale distributions of phytoplankton.pdf (820.97 KB)
